BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A01LP1|AL426441
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1593 0.0
>3x_Contig1789
Length = 30977
Score = 1593 bits (790), Expect = 0.0
Identities = 811/832 (97%)
Strand = Plus / Minus
Query: 1 gatcaaatttgacggtgaagaaggtttagattatggtggtgtttcaagagaattcttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11394 gatcaaatttgacggtgaagaaggtttagattatggtggtgtttcaagagaattcttctt 11335
Query: 61 tttactatcacacgagatgtttaatcccttctactgtctatttgaatattctgcccatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11334 tttactatcacacgagatgtttaatcccttctactgtctatttgaatattctgcccatga 11275
Query: 121 taactatactatccaaatcaatccaaacagtggtatcaaccctgagcatttgaactactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11274 taactatactatccaaatcaatccaaacagtggtatcaaccctgagcatttgaactactt 11215
Query: 181 caagttcattggtagagtcgtcggtttaggtgtattccatagaaggttcttggatgcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11214 caagttcattggtagagtcgtcggtttaggtgtattccatagaaggttcttggatgcatt 11155
Query: 241 cttcgttggtgctctatataagatgatgctaagaaagaaggtagtattacaagatatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11154 cttcgttggtgctctatataagatgatgctaagaaagaaggtagtattacaagatatgga 11095
Query: 301 aggtgtcgattcagaagtctacaactccttgaaatggattttagaaaatagcatagatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11094 aggtgtcgattcagaagtctacaactccttgaaatggattttagaaaatagcatagatgg 11035
Query: 361 cattttagatctaacatttaatgttgatgatgaaagatttggtgaactggttgtcgtcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11034 cattttagatctaacatttaatgttgatgatgaaagatttggtgaactggttgtcgtcga 10975
Query: 421 tttgaaaccaaacggcagagaaatcgaagtcacagatgaaaacaagaaagaatatgttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10974 tttgaaaccaaacggcagagaaatcgaagtcacagatgaaaacaagaaagaatatgttga 10915
Query: 481 actatatacccaatkgaggatcgcakacagakttcaagaacaatttaakkcatttatkga 540
|||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||| ||
Sbjct: 10914 actatatacccaatggaggatcgcagacagagttcaagaacaatttaaggcatttatgga 10855
Query: 541 tkgatttaacgaattggttcctgaagatctagtcaacgtgtttkatgaacgtkaacttka 600
| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 10854 tggatttaacgaattggttcctgaagatctagtcaacgtgtttgatgaacgtgaacttga 10795
Query: 601 attattkattkgtggtattkcagaaattkatgttkaakactkgaaaamacacacagatta 660
|||||| ||| |||||||| |||||||| ||||| || ||| ||||| ||||||||||||
Sbjct: 10794 attattgattggtggtattgcagaaattgatgttgaagactggaaaaaacacacagatta 10735
Query: 661 tcgtggataccaagagtctgacgaagttatccagtggttctggaaatgtatcactgaatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10734 tcgtggataccaagagtctgacgaagttatccagtggttctggaaatgtatcactgaatg 10675
Query: 721 ggacaacgagcaaakagcacgtttkttacaattcacaactkgtacatcgcgtatcccggt 780
|||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 10674 ggacaacgagcaaagagcacgtttgttacaattcacaactggtacatcgcgtatcccggt 10615
Query: 781 caatggattcaaagatttgcaaggttctgatggtccaagaagattcactatc 832
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10614 caatggattcaaagatttgcaaggttctgatggtccaagaagattcactatc 10563
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6196
Number of Sequences: 1807
Number of extensions: 6196
Number of successful extensions: 132
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)